Infections of the Respiratory System

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Infections of the Respiratory System

WHY YOU NEED TO KNOW

HISTORY

Exposure to about 8 microbes per minute, or approximately 10,000 per day, makes the respiratory tract one of the most common sites for pathogenic infection in the body, as it is in direct contact with the physical environment and the microorganisms contained therein. Couple this with its warm, moist, barrier-layered surfaces and you have excellent conditions for trapping particles to allow for infections. From the common cold to pneumonia, the respiratory tract has been an avenue for the introduction of viruses and bacteria that have persisted with us through the ages, producing disease ranging in severity from merely irritable to lethal. The name “cold” is perhaps a misnomer that was used to describe the season in which the symptoms became more prevalent or the action of the organisms on thermogenesis, which is the process by which the body generates heat or energy by increasing the metabolic rate. The process of thermogenesis can be triggered by conditions such as wet hair, body parts exposed to drafts, or extended periods of time waiting in low temperatures.

Common cold symptoms were recorded in ancient Egypt and Hippocrates referred to the disease in the 400s bc. Early American Indian, Mayan, and Aztec cultures recorded descriptions of the cold; Aztec treatments consisted of chili pepper, honey, and tobacco mixtures.

Wet feet and wet clothes as possible causes for the common cold were stated early in the 1700s and 1800s by John Wesley and William Buchan, respectively. After the discovery of viruses in the late 1800s and their association with the common cold, acute viral nasopharyngitis became the descriptive name of this malady. While the role of bacteria in the germ theory of disease held sway early on, antibiotics failed to cure colds because of their viral cause although they did alleviate accompanying bacterial irritations and secondary infections.

Pneumonia, a respiratory tract disease, occurs as a result of inflamed alveoli filling with fluid, which prevents them from transporting gases needed to support life on a minute-by-minute basis. There are multiple causes of pneumonia, such as bacterial, viral, fungal, or parasitic infections as well as chemical or physical injury; or it may be a secondary condition to another illness such as alcohol abuse or cancer. Severe acute respiratory syndrome (SARS) is caused by the highly contagious SARS coronavirus, which first occurred in 2003 after initial outbreaks in China. According to the World Health Organization (WHO) more than 8000 people worldwide became sick in the 2003 outbreak and of these 774 died.

IMPACT

While the common cold negatively impacts school and work attendance, it positively contributes to visits to physicians and drugstores. This most common of afflictions suffered by humans conservatively costs just under $8 million dollars in visits to physicians and just under $3.5 billion dollars in over-the-counter and prescription drug costs per year. In addition to medically related costs, just under 200 million school days are missed by students each year and just under 130 million workdays by their parents to stay at home with them. Add this to the workdays missed by employees and cold-related work loss is in excess of $20 billion per year.

Pneumonia is common in all age groups but is the leading cause of death among the elderly and those who are chronically or terminally ill. Vaccines are effective for some pneumonia-causing agents, unlike the common cold, which has no cure, only supportive care.

Introduction

The respiratory tract consists of the nasal cavity, the pharynx, larynx, bronchial tree, and lungs. Structurally and functionally the system can be divided into upper and lower respiratory systems (Figure 11.1).

The lining of the respiratory tract is a mucosal epithelium that serves as a barrier against microbial invasion; however, it is not as effective as an intact skin barrier. The mucosal lining of the respiratory tract has a moist and relatively warm environment suitable for microbes. Moreover, microbes may be trapped in the mucous layer and by way of the ciliary escalator transported to the pharynx and then swallowed. The normal flora (see Chapter 9, Infection and Disease) of the respiratory system contains a large number of bacteria that help to maintain a healthy state of the host by competing with potential pathogenic organisms. The microorganisms of the normal flora are usually harmless but they can become opportunistic pathogens when the host immune system is depressed, or when damage occurs to the mucosal membrane. Infections of the respiratory system can be caused by bacteria, viruses, and fungi. For an infection of the respiratory system to occur due to an exogenous agent the following criteria must be met:

Bacterial Infections

Most of the upper respiratory tract mucosa is colonized by normal flora. The most common bacteria found in the normal flora of the upper respiratory tract are Staphylococcus aureus and S. epidermidis. In addition, aerobic corynebacteria can be cultured from nasal surfaces. Moreover, small numbers of Streptococcus pneumoniae, Neisseria meningitidis, and Haemophilus influenzae can be found in the nasopharynx of some individuals. α-Hemolytic streptococci including S. mitis, S. mutans, S. milleri, and S. salivarius are considered important organisms in this area because it is believed that these bacteria protect against invasion by pathogenic streptococci; however, these same organisms can also cause tooth decay and periodontal disease if unchecked.

Bacterial infections of the respiratory tract can be caused by Staphylococcus, Streptococcus, Klebsiella, Haemophilus, Bordetella, Corynebacterium, Mycobacterium, Legionella, Mycoplasma, Chlamydia, and Coxiella. Infections caused by inhabitants of the normal flora can occur and appear as secondary infections after damage to the mucosal lining, usually caused by a viral infection such as the common cold. A summary of bacterial infections acquired through the respiratory system is given in Table 11.1.

TABLE 11.1

Bacterial Infections Acquired Through the Respiratory Tract

Illness/Disease Organism(s) Target of Infection Transmission
Streptococcal pharyngitis (strep throat) Group A Streptococcus Pharynx Nasal or salivary secretions; person-to-person contact
Scarlet fever Streptococcus pyogenes Pharynx, tongue Direct contact with infected person; nasal droplets; fomites such as shared drinking glasses
Drug-resistant Streptococcus pneumoniae disease (DRSP) Streptococcus pneumoniae Pharynx, lungs, alveoli Person-to-person contact
Mycoplasmal pneumonia Mycoplasma pneumoniae Lungs; mucous membranes Nasal secretions among people in crowded environments
Chlamydial pneumonia Chlamydia pneumoniae Lungs Inhalation of respiratory droplets
Pertussis (whooping cough) Bordetella pertussis Trachea—ciliated epithelial cells Inhalation of respiratory droplets
Tuberculosis Mycobacterium tuberculosis Lungs Inhalation of respiratory droplets
Staphylococcal pneumonia Staphylococcus aureus; S. pneumoniae Lungs Nosocomial; complication after influenza
Haemophilus infections Haemophilus influenzae Pharynx, bronchi, lungs Inhalation of respiratory droplets
Klebsiella pneumonia Klebsiella pneumoniae Lungs Nosocomial
Diphtheria Corynebacterium diphtheriae Respiratory membranes Inhalation of respiratory droplets
Legionellosis Legionella pneumophila Lungs Inhalation of contaminated water mist
Psittacosis (“parrot fever”) Chlamydia psittaci Lungs Inhalation of dried bird excrements or secretions
Inhalation anthrax Bacillus anthracis Lungs Inhalation of spores
Q fever Coxiella burnetii Lungs Inhalation of contaminated droplets excreted by infected animals

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Streptococcal Infections

The genus Streptococcus is composed of spherical gram-positive bacteria well known for being responsible for “strep throat,” but is also capable of causing meningitis, pneumonia, endocarditis, erysipelas, necrotizing fasciitis (see Chapter 10, Infections of the Integumentary System, Soft Tissue, and Muscle), and toxic shock syndrome. The virulence of group A Streptococcus seems to be increasing worldwide.

Strep Throat (Streptococcal Pharyngitis)

Strep throat or streptococcal pharyngitis is caused by group A Streptococcus bacteria and is the most common bacterial infection of the throat. Although this infection can occur at any age, it is most common in children between the ages of 5 and 15 years. Strep throat is transmitted by person-to-person contact via nasal secretions or saliva (sneezing and/or coughing) by an infected individual or a carrier. On occasion, contaminated food, especially milk and milk products, may be the cause of the infection.

The infection occurs with higher frequency in the late fall, winter, and early spring. Most sore throats are caused by viruses, not by bacteria, and therefore the Centers for Disease Control and Prevention (CDC, Atlanta, GA) recommends that antibiotics not be used unless the test for streptococcal infection proves to be positive, because bacterial resistance to certain antibiotics has been reported. However, if results are positive for Streptococcus, patients should receive antibiotics to minimize transmission and to reduce the risk of further complications, such as rheumatic fever.

Scarlet Fever

Scarlet fever is an upper respiratory disease also caused by an infection with a group A β-hemolytic streptococcus (Streptococcus pyogenes) (Figure 11.2) and once was a serious childhood disease but now is generally treatable. The incubation period is 1 to 2 days and typically begins with a fever and sore throat, but might also exhibit chills, vomiting, abdominal pain, and malaise. The exotoxin produced by the bacteria is responsible for the “strawberry” tongue (Figure 11.3) as well as the characteristic fine rash on the chest, neck, groin, and thighs. The treatment of scarlet fever is the same antibiotic treatment as for strep throat, and complications with appropriate treatment are rare.

Streptococcus pneumoniae

Streptococcus pneumoniae is a gram-positive, encapsulated α-hemolytic diplococcus (Figure 11.4), also known as pneumococcus, and is a common cause of mild respiratory illness, but also a major source of pneumonia. Other than pneumonia the organism is also capable of causing pharyngitis, sinusitis, otitis media, meningitis, osteomyelitis, septic arthritis, endocarditis, peritonitis, pericarditis, cellulitis, and brain abscess. S. pneumoniae is a common inhabitant of the nasopharynx of healthy people, but can be the cause of disease when the organism reaches other areas such as the eustachian tubes, nasal sinuses, and lungs. Furthermore the organism can be found in larger numbers in environments where people spend a lot of time in close proximity and it can be transmitted by person-to-person contact or by inhalation. If the organism is inhaled and not removed by the ciliary escalator (such as in smokers, in whom the cilia have been damaged or degenerated), or the mucous membranes are damaged by a viral infection, the bacteria can attach or even penetrate the mucosa. Once the organism succeeds in getting to a site where it normally is not found it will stimulate the immune system of the host, resulting in the attraction of leukocytes (see Chapter 20, The Immune System). The capsule of S. pneumoniae is resistant to phagocytosis and if immunity is not present the alveolar macrophages are incapable of destroying pneumococci. In this case the bacterium spreads into the bloodstream, where it most likely causes bacteremia. The organism then can get to other areas of the body, causing the conditions mentioned earlier. The virulence of S. pneumoniae is a direct result of its capsule and the encapsulated (smooth) strains are the ones causing disease, whereas the nonencapsulated (rough) strains are avirulent.

The onset of bacterial pneumonia can vary from gradual to sudden. In severe cases patients may have fever, shaking chills, shortness of breath, cough with rust-colored or greenish mucus, and pleuritic chest pain. Fever and sputum production may be absent in elderly persons with pneumococcal pneumonia. Pneumonia can sometimes appear in a mild form, often referred to as “walking pneumonia,” in which symptoms are slight or absent. The risk for bacterial pneumonia is highest for young children, the elderly, people with chronic medical conditions (e.g., heart disease, lung disease, and diabetes), and persons who have a suppressed immune system. Because bacterial pneumonia can easily be passed from one member of the community to another, it can manifest itself in a condition referred to as “community-acquired pneumonia.” This form of the disease occurs worldwide and is a major cause of death among all age groups.

Vaccination is available for the prevention of pneumococcal pneumonia. Two vaccines are currently available: the pneumococcal conjugate vaccine, which is part of the routine infant immunization schedule, and the pneumococcal polysaccharide vaccine used for adult immunization. Vaccination with the pneumococcal polysaccharide vaccine is recommended for all adults age 65 years and older and for persons 2 to 64 years of age with certain chronic illnesses or immunocompromising conditions. Without vaccination the treatment of choice used to be penicillin; however, because of overuse of antibiotics nearly all strains of S. pneumoniae previously susceptible to penicillin show resistance to penicillin as well as to other antibiotics.

Drug-resistant Streptococcus pneumoniae Disease

Drug-resistant Streptococcus pneumoniae disease (DRSP) manifests itself as pneumonia, bacteremia, otitis media, meningitis, peritonitis, and sinusitis. These conditions can be caused by an organism that is resistant to one or more commonly used antibiotics. Overuse of antimicrobial agents is a contributing factor to the emerging resistance and spread of resistant strains. Transmission occurs by person-to-person contact and the risk groups are mostly the elderly, children 2 years of age or older, persons who attend or work at child care centers, immunocompromised patients (e.g., those with AIDS), and also persons who recently used antimicrobial agents. Outbreaks of DRSP have been reported in nursing homes, child care centers, and in institutions for HIV-infected people. A pneumococcal conjugate vaccine is available and its use is preventing many infections due to drug-resistant pneumococci. Future increased use of the vaccine, systematic surveillance, and routine testing for the drug-resistant strains might slow down the emerging drug resistance of this bacterium.

Other Common Infections

Mycoplasmal Pneumonia

Mycoplasma pneumoniae, a small bacterium that lacks a cell wall (Figure 11.5), is the cause of primary atypical pneumonia, a relatively mild pneumonia, which usually affects people younger than 40 years of age. Transmission occurs by respiratory droplets through inhalation or person-to-person contact. The incubation period lasts 10 to 14 days and epidemics can occur, especially in crowded areas such as in schools, among military personnel, in homeless shelters, and within a family. Symptoms may last 1 to 3 weeks, starting with fatigue, a sore throat, and a dry cough. It resembles influenza at the beginning, followed by worsening of the cough, which eventually produces sputum. Although it is usually a mild condition and most people recover without treatment, severe cases require antibiotic treatment. It should be noted that because of the lack of a cell wall these organisms are resistant to penicillin and other β-lactam antibiotics (see Chapter 22, Antimicrobial Drugs), which act by interrupting the formation of peptidoglycan cross-links of bacterial cell walls.

Pertussis (Whooping Cough)

Pertussis, also known as whooping cough, is a highly contagious disease caused by Bordetella pertussis, an extremely small, aerobic, gram-negative coccobacillus (Figure 11.6). It is a serious disease that can cause permanent disability and even death. Pertussis is easily spread from person to person by airborne droplets discharged from the mucous membranes of infected people. Initial symptoms occur about a week after exposure and resemble those of the common cold. The severe coughing spells start approximately 10 to 12 days later and these spells may lead to vomiting. The coughing often ends with a “whoop” noise caused when the patient is trying to take a breath. Despite the availability of, and high coverage with vaccines, pertussis is one of the leading causes of vaccine-preventable deaths worldwide. Ninety percent of all cases occur in the underdeveloped countries and most deaths involve infants who are either not vaccinated or incompletely vaccinated. Treatment with effective antibiotics, if started early, shortens the infectious period but usually does not alter the outcome of the disease.

Tuberculosis

Tuberculosis (TB) is a deadly infectious disease caused by Mycobacterium tuberculosis (Figure 11.7). TB is transmitted through the air when an infected person coughs, sneezes, or even talks. Moreover, TB is no longer a disease of the past; it is still a leading killer of young adults worldwide. TB is a chronic condition that usually infects the lungs, but other parts of the body might be involved as well. Most people infected with the organism do not show symptoms, but have latent tuberculosis. According to the World Health Organization (WHO, Geneva, Switzerland) estimate, annually 8 million people worldwide will develop active TB with nearly 2 million deaths. The risk for development of the disease is higher in the first year after infection, but the disease still can occur much later.

After the first effective antibiotic treatments were introduced (1940s and 1950s), the incidence of tuberculosis in the United States declined. The decline in new cases ended in 1985 and the incidence of TB started to rise again. According to the National Institute of Allergy and Infectious Diseases (NIAID, Bethesda, MD), several factors are responsible for this resurgence, such as the following:

• The HIV/AIDS epidemics: People with HIV have an immunocompromised immune system and are more likely to develop active TB, even shortly after first infection.

• Increased numbers of foreign-born nationals who enter the United States from places that have a high incidence of TB cases: These places include Africa, Asia, and Latin America. More than half of the TB cases in the United States are among foreign-born nationals now living here.

• Failure of patients to complete the prescribed antibiotic treatment: These patients stay infectious longer and transmit the disease to more people. Furthermore, incomplete antibiotic treatment can contribute to antibiotic-resistant strains of M. tuberculosis.

• Increasing number of elderly in the United States: The increase in the aging population in the United States results in greater numbers residing in long-term facilities. Many of these elderly have declining health and may develop active TB from an infection they obtained much earlier in life.

Initial symptoms of active TB include weight loss (hence in the past, the disease was referred to as consumption), fever, night sweats, and loss of appetite. In the case of vague symptoms the infection might go unnoticed and can go into remission or become more chronic and debilitating. These symptoms include cough with chest pain and bloody sputum. Treatment is possible with appropriate antibiotics, which are generally effective, and most people can be cured. Successful treatment can last up to 12 months or longer, using different types of antibiotics. The success of the treatment also depends on the strain of the organism with which the patient is infected. Antibiotic-resistant strains are more difficult to treat, require different drugs, and an increased time of treatment might be necessary. If a person is infected with a strain that is resistant to two or more drugs the condition is called multidrug-resistant TB (MDR-TB), which is much more difficult to cure.

Tuberculosis can largely be prevented. In the United States health care providers attempt to identify people infected with M. tuberculosis as early as possible to prevent the development of active TB and the spread of the disease. Infected persons will receive isoniazid (INH) every day for 6 to 12 months to prevent active TB. Hospitals isolate people with active TB in controlled environments until spreading is no longer a threat.

TB vaccines are available and the WHO suggests that they be used in countries of the world where the disease is endemic. The vaccine is produced from a live weakened bacterium related to M. tuberculosis and is recommended for administration to infants.

Several new and better vaccines for the prevention of TB infection are being developed and have entered clinical trials in the United States. At present, health experts in the United States do not recommend the use of the vaccine for general use in this country because it makes the screening procedures for infected individuals more difficult. The TB skin test, also known as the tuberculin PPD test, is used for screening purposes and will show positive results in persons who currently has TB or were exposed or vaccinated in the past. The test is based on the fact that an encounter with M. tuberculosis produces a delayed hypersensitivity skin reaction (see Chapter 20, The Immune System) to certain components of the bacterium.

LIFE APPLICATION

Tuberculosis and Air Travel

In the early 1990s reports of tuberculosis (TB) transmission during long flights raised serious concerns among public health officials and airlines. These reports included the most dangerous form of TB—the multidrug-resistant TB (MDR-TB). The World Health Organization (WHO) published the first guidelines in 1998, defining the extent of the problem, the potential risks, and recommendations for travelers, physicians, health authorities, and airlines. In addition to raised awareness of the risk for TB transmission on board an aircraft, other airborne diseases caused major international public health emergencies, involving the actual or potential transmission of infection during international flights. Furthermore, the increased incidence of MDR-TB in the following years has raised special concerns in relation to the international spread of particularly dangerous strains of Mycobacterium tuberculosis. A revised third edition of “Tuberculosis and Air Travel: Guidelines for Prevention and Control” was prepared by the WHO in collaboration with the International Civil Aviation Organization, the International Air Transport Association, international experts in tuberculosis and other infectious diseases, as well as leading authorities in public health and travel medicine. This new edition was published in 2008 and is available online (see references).

In 2007, these guidelines did not prevent extensive air travel by Andrew Speaker, a resident of Atlanta, Georgia. Although diagnosed with an antibiotic-resistant strain of TB just before his travel, he claims that he was not adequately warned of the risk of spreading the disease on a long trip in a confined area such as an airplane. On his return to the United States, after traveling to France, Greece, Italy, the Czech Republic, and Canada, he was served with an isolation order by the Centers for Disease Control and Prevention (CDC). The legal problems in dealing with a situation such as this are complex and still under review by several organizations, including the CDC.

Rare and Opportunistic Infections

Staphylococcal Pneumonia

Respiratory infections due to staphylococci are relatively rare in the healthy adult but are common opportunistic organisms in compromised hosts in hospitals and other institutions, causing hospital-acquired and institution-acquired pneumonia. Staphylococcus aureus, a gram-positive coccus (Figure 11.8), causes only 2% of community-acquired pneumonias, but 10% to 15% of hospital-acquired pneumonias are due to this organism. These infections most likely occur in people who are hospitalized with another disease and often involves the very young, the old, and people with another debilitating illness. Although the illness is rare, it is serious and causes death in about 15% to 40% of the cases. Treatment is usually a type of penicillin; however, more strains of Staphylococcus are becoming resistant to these and the use of other antibiotics such as vancomycin may be required. Staphylococcal pneumonia also has been reported to be the cause of severe complications after the 2003–2004 influenza seasons.

Haemophilus Infections

Many Haemophilus species are part of the normal flora in the upper airways of children and adults and most of them rarely cause disease. However, Haemophilus influenzae, a gram-negative coccobacillus (Figure 11.9), is a common cause of infection (bronchiolitis) in children and chronic bronchitis in adults, and occasionally meningitis.

H. influenzae and S. pneumoniae are sometimes isolated from the same individual. The transmission occurs by aerosols from an infected individual. Children are routinely and successfully vaccinated against Haemophilus influenzae type b, especially for the prevention of meningitis.

Diphtheria

Diphtheria is caused by Corynebacterium diphtheriae, a facultative anaerobic, gram-positive bacillus (Figure 11.10), which attacks the throat and nose. It is an upper respiratory illness characterized by a sore throat, low-grade fever, and the formation of a pseudomembrane on the tonsils and pharynx. The formation of the pseudomembrane can cause life-threatening respiratory obstruction. It is a highly contagious disease easily spread by direct physical contact or aerosol secretions from an infected individual. Once the infection takes place the bacterium produces an exotoxin that can potentially spread via the bloodstream to other organs such as the heart and cause significant damage.

A vaccine is available and because of widespread routine childhood immunization, diphtheria is rare in the United States and in many other countries. It is reemerging in some parts of the world where immunization practices are not strictly followed. Other risk factors include crowded environments and poor hygiene.

Diphtheria is a medical emergency and delay in treatment can result in long-term heart disease. Treatment includes antitoxin to eliminate the toxin and antibiotics to eliminate the toxin-producing bacteria themselves. Recovery from the illness is slow and the death rate from diphtheria is 10% in infected patients.

Legionellosis

Legionellosis is an illness caused by Legionella pneumophila, a gram-negative bacillus found in water sources in the environment. The disease has two distinct forms:

Legionellosis is contracted when people inhale water mist containing the bacteria. Mist-producing devices that potentially can contain Legionella include air-conditioning systems in homes, workplaces, hospitals, or other public gathering places. Legionellosis is not spread from person to person, but only through contaminated water sources.

The symptoms of Pontiac fever include fever and muscle aches but do not include pneumonia, and infected persons usually recover within 2 to 5 days without requiring treatment. Persons with Legionnaire’s disease show more severe symptoms, including high fever, chills, and a cough that might or might not produce sputum. Other symptoms may include muscle aches, headache, tiredness, loss of appetite, and occasionally diarrhea. Chest x-rays often indicate signs of pneumonia. Distinguishing Legionnaire’s disease from other pneumonias is difficult on the basis of symptoms alone; specific tests are needed for a safe diagnosis. These tests include detecting Legionella in sputum and body fluids, or finding specific antibodies in the blood of the patient. Legionnaire’s disease can be treated with antibiotics.

Psittacosis

Psittacosis is an infection caused by Chlamydia psittaci, an obligate intracellular bacterium found in bird droppings. The illness is also known as parrot disease, parrot fever, and ornithosis. In birds the infection is referred to as avian chlamydiosis and Chlamydia is shed by infected birds through feces and nasal discharges, which can remain infectious for months. Psittacosis is a rare zoonotic infection and is spread from birds to humans. People at risk include bird owners, pet shop employees, workers in poultry-processing plants, and veterinarians. The symptoms of the disease include fever, chills, headache, muscle aches, dry cough, and often pneumonia. The incubation period after inhalation of dry bird secretions is 5 to 19 days. The infection is treated with antibiotics.

Inhalation Anthrax

Anthrax is an acute infectious disease caused by Bacillus anthracis, a gram-positive, spore-forming, facultative anaerobe (Figure 11.11), commonly found in wild and domestic vertebrates. The disease is zoonotic and can occur in humans if a person is exposed to an infected animal, tissue from an infected animal, or spores of the bacterium. The infection can be attained through the skin, by inhalation, or ingestion. There is no known transmission of anthrax from person to person. Symptoms of the disease vary depending on how it was acquired. Symptoms commonly occur within 7 days, but can take up to 60 days. Inhaling the spores only means that a person has been exposed to the disease; it does not mean that symptoms automatically appear, because the bacterial spores must germinate before the actual disease occurs. Once the spores germinate, they release several toxins that cause internal bleeding, swelling, and tissue necrosis. Anthrax spores can remain viable in the environment for 50 years.

The initial symptoms of anthrax when the bacterial spores are acquired through inhalation are similar to those of a common cold, including fever, chills, sweating, fatigue, malaise, headache, cough, shortness of breath, and some chest pain. After several days the symptoms usually progress to the second stage with fever, severe breathing problems, and shock. Cutaneous anthrax appears as a large, deep lesion on the skin, and gastrointestinal anthrax causes lesions in the intestinal tract, often with intestinal bleeding. Antibiotic therapy administered after known or suspected exposure can help prevent the disease. Several antibiotics are effective against anthrax; however, if the second stage has been reached, inhalation anthrax is usually fatal. Vaccination has been developed and is available to select U.S. military personnel, but not to the general public. Anthrax spores and their use in bioterrorism are discussed in Chapter 24 (Microorganisms in the Environment and Environmental Safety).

Q Fever

Q fever is a zoonotic disease caused by Coxiella burnetii, a gram-negative, coccobacillus that can form sporelike structures. The species is distributed globally and affects sheep, goats, cattle, dogs, cats, birds, rodents, and ticks. The organism can be excreted in milk, urine, and feces and is also shed in high numbers in the amniotic fluid and placenta during the birthing process. Coxiella is resistant to heat, drying, and common disinfectants, and therefore it can survive for long periods of time in the environment. Humans can acquire the infection by inhaling the organism from contaminated barnyard dust, birth fluids, and excreta of infected herd animals. Bites from infected ticks are another possible mode of transmission.

The susceptibility of humans to this disease is high and a small number of organisms appear to be causing the disease. The incubation time depends on the number of organisms that infect the patient, but symptoms usually occur within 2 to 3 weeks of exposure. Symptoms of acute Q fever include fever, headache, muscle pains, cough, chest pain during breathing, shortness of breath, jaundice, and clay-colored stools. Antibiotic treatment is most effective when started early. Chronic Q fever develops in persons who have not been treated effectively within 6 months of the initial exposure and management may require a combination of drugs and prolonged duration of treatment. Because of the nature of the agent (resistant to heat and drying) and human susceptibility to the organism it could be developed for use in biological warfare and, like anthrax, is considered a potential terrorist weapon.

HEALTHCARE APPLICATION
Pneumonias

Organism Features Transmission Treatment/Prevention
Streptococcus pneumoniae Shaking chills, fever, pleuritic chest pain, cough, rust-colored or greenish mucus Inhalation of droplets Pneumococcal conjugate vaccine; pneumococcal polysaccharide vaccine; antibiotics (amoxicillin, cephalosporins, erythromycin, azithromycin, clarithromycin, fluoroquinolones)
Haemophilus influenzae More common in patients with COPD, alcoholics, and the elderly Inhalation of respiratory droplets Haemophilus influenzae type b vaccine; antibiotics (cephalosporins, amoxicillin-clavulanate, azithromycin, fluoroquinolones, trimethoprim-sulfamethoxazole)
Legionella pneumophila High fever, chills, cough with or without sputum, muscle aches, headache, tiredness, loss of appetite, occasionally diarrhea Inhalation of water mist; not spread between people Antibiotics (erythromycin, azithromycin, fluoroquinolones)
Mycoplasma pneumoniae Fatigue, sore throat, dry cough; eventually sputum production Close contact; inhalation of respiratory secretions Mild cases may not require treatment; home care includes rest, high-protein diet, and adequate fluid intake; severe cases treated with antibiotics (erythromycin, doxycycline, azithromycin, clarithromycin fluoroquinolones)
Chlamydia pneumoniae Gradual onset of cough, little or no fever Inhalation of respiratory secretions Antibiotics (erythromycin, doxycycline, azithromycin, clarithromycin, fluoroquinolones)
Staphylococcus aureus Multiple bilateral nodular infiltrates with central cavitations; common in patients with cystic fibrosis IV drug use, inhalation of droplets, postinfluenza Antibiotics—usually penicillin, but many strains are becoming resistant and other antibiotics may have to be used (cephalosporins, nafcillin, oxacillin, vancomycin)
Klebsiella pneumoniae Opportunistic in infants, older people, alcoholics, people with chronic disease Mostly nosocomial; also community-acquired Antibiotics, supplemental oxygen, intravenous fluids
Bacillus anthracis Fever, chills, sweating, fatigue, malaise, headache, cough, shortness of breath, chest pain, shock; formation of skin eschars, gastrointestinal hemorrhaging Inhalation of spores, ingestion or penetration through a break in the skin Vaccination for U.S. military personnel, not for general population; antibiotics for about 60 days (ciprofloxacin, penicillin, doxycyline)
Viral pneumonia; can be caused by several viruses including influenza viruses, parainfluenza, adenovirus, rhinovirus, herpes simplex virus, respiratory syncytial virus, hantavirus, and cytomegalovirus Fever, dry cough, headache, muscle pain, and weakness; followed by increasing breathlessness, high fever, and worsened cough that may produce a small amount of mucus Person-to-person contact; respiratory droplets Supportive care including humidified air, increased fluids, and oxygen; serious forms can be treated with antiviral medications
Histoplasma capsulatum Fever, headache, nonproductive cough Inhalation of fungal spores Mild cases resolve without treatment; antifungal drugs (itraconazole, ketoconazole)
Coccidioides immitis Cough, chest pain, fever, chills, night sweats, headache, muscle stiffness, rash, blood-tinged sputum, weight loss, wheezing, and more Inhalation of airborne arthroconidia Acute form usually fades without treatment—symptomatic treatment may be recommended; severe disease should be treated with antifungal medications (amphotericin B, ketoconazole, fluconazole, itraconazole)
Blastomyces dermatitidis Cough with possible brown or bloody mucus, shortness of breath, sweating, fever, fatigue, malaise, weight loss, joint stiffness, muscle stiffness, rash, chest pain Inhalation of fungus from soil Mild infections of the lungs do not require treatment; severe infections need antifungal medication
Aspergillus Chest pain, cough (dry, or producing blood or phlegm), shortness of breath, fever, joint pain, weight loss Inhalation of spores Antifungal medication (amphotericin B, itraconazole, voriconazole, caspofungin)

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COPD, Chronic obstructive pulmonary disease; IV, intravenous.

Viral Infections

Although many bacteria are part of the resident normal flora of the upper respiratory system, a large number of viruses are probably part of the transient flora of the nasopharyngeal cells as well. Not all infections of cells cause disease, and such infections might not be apparent because of the lack of symptoms. Moreover, most virions that are able to reach the lungs are destroyed by alveolar macrophages. Nevertheless, an estimated 90% of acute upper respiratory and approximately 50% of lower respiratory infections are caused by viruses (Table 11.2).

TABLE 11.2

Viral Infections Acquired Through the Respiratory Tract

Illness/Disease Organism(s) Target of Infection Transmission
Common cold Adenovirus Respiratory tract Respiratory droplets
Rhinovirus Upper respiratory tract Respiratory droplets; fomites; person-to-person contact
Influenza Influenza virus Lungs, respiratory tract Inhalation of airborne viruses; via fomites
Mumps Mumps virus (paramyxovirus) Upper respiratory cells Respiratory secretions
SARS SARS coronavirus Lungs Inhalation of airborne viruses

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SARS, Severe acute respiratory syndrome.

Common Cold

A great many varieties of viruses are frequent invaders of the nasopharynx and are responsible for the common cold. The common cold is normally mild and self-limiting. The common cold is the most frequent of all human diseases and typically lasts 3 to 5 days. Symptoms of the common cold usually involve rhinitis, a runny nose, nasal congestion, and sneezing. A sore throat, cough, headache, or other symptoms may be present as well. The nasal secretions usually become thicker within 1 to 3 days and may be yellow or green in appearance. In children with asthma the common cold is the most prevalent trigger of asthmatic symptoms. Colds also are a common precursor of ear infections, but congested ears during the common cold are not necessarily a sign of a bacterial infection, but just fluid buildup as a side effect of the cold.

More than 1 billion colds caused by over 200 viruses occur in the United States each year. Children average three to eight colds a year while adults average two to four infections annually. Children usually get colds from other children and when a new strain shows up in a school or day care center it is highly contagious and rapidly spreads throughout the class. Parents usually obtain the infection from their school-aged children. Transmission can occur through aerosols, but most commonly the disease spreads by contaminated hands or fomites. People are most contagious for the first 2 to 3 days, less contagious in the following days, and generally contagion free by day 7 to 10. There is no specific treatment for a cold except plenty of rest and lots of fluids to relieve symptoms. Over-the-counter medication may help to relieve these symptoms, but will not shorten the duration of the disease. Antibiotics should not be used to treat the common cold because of its viral origin, and they should be given only if signs of a secondary bacterial infection occur.

Influenza

Influenza viruses are primary causes for epidemics and endemic diseases of the respiratory system. Influenza (flu) is caused by orthomyxoviruses. They are RNA viruses designated as types A, B, and C. The viruses spread from person to person mainly through coughing or sneezing by infected people, or by fomites and then by hand from touching the mouth, nose, or eyes.

Influenza viruses A and C are capable of infecting a variety of species, whereas influenza B infects primarily humans. Type A viruses are the most virulent human pathogens among these three types of flu viruses and cause the most severe disease state. Because influenza viruses kill epithelial cells, the first line of defense of the lung against infection is broached and flu patients become more susceptible to bacterial infections than do healthy individuals. This susceptibility is likely to be further increased due to a virus-induced immune suppression, common in influenza patients.

The influenza genome is not a single piece of nucleic acid, but instead consists of 8 pieces of segmented negative-sense RNA, encoding 11 proteins. Two of these proteins, hemagglutinin and neuraminidase, large glycoproteins, are well characterized and found on the outside of the viral particles (Figure 11.12, A and B). Neuraminidase is an enzyme involved in the release of the progeny viruses from infected cells. Hemagglutinin is a lectin that mediates the binding of the virus to target cells and the subsequent entry of the viral genome into the host. After the release of the newly produced influenza viruses the host cell dies.

Influenza viruses can be subdivided into different strains based on their antigenic characteristics (Box 11.1). New influenza virus variants are the result of frequent antigenic changes (i.e., antigenic drift) resulting from point mutations during viral replication. These rapid mutations are partially due to the absence of RNA-proofreading enzymes. As a result, RNA-dependent RNA transcriptase makes a single-nucleotide insertion error about once every 10,000 nucleotides, making almost every newly formed influenza virus a potential mutant. The influenza B viruses undergo antigenic drift less frequently than the influenza A viruses.

Manifestation of flu signs and symptoms during an outbreak of the flu is usually sufficient for the diagnosis of influenza. These symptoms include the following:

Laboratory tests such as immunofluorescence or enzyme-linked immunosorbent assay (ELISA) can be used to distinguish between viral strains if necessary. Complications that occur with influenza include bacterial pneumonia, ear infections, sinus infections, dehydration, and worsening of chronic existent medical conditions, such as congestive heart failure, asthma, or diabetes.

Epidemics of influenza in the United States typically appear during the winter months, causing disease among all age groups. Every year millions of Americans are infected and an estimated 36,000 Americans die of influenza-related illness. Especially vulnerable are people with a weak immune system such as the very young, the elderly, and those with a compromised immune system as a result of cancer therapy or disease. Influenza vaccination, that is, the annual “flu shot,” is the primary method for preventing the flu and its possible complications. Vaccination can prevent hospitalization and death among people at risk, but also will reduce flu-associated respiratory illnesses among people of all age groups. According to the Advisory Committee on Immunization Practices (ACIP), a part of the CDC, annual influenza vaccinations are recommended for people at high risk for influenza-related complications, and persons who live with or care for persons at high risk (Box 11.2).

Viral Pneumonia

Half of all pneumonias are believed to be caused by viruses such as the influenza virus, adenovirus, coxsackievirus, varicella-zoster virus, measles virus, cytomegalovirus, and respiratory syncytial virus. Symptoms of viral pneumonia include fever, nonproductive cough, rhinitis, myalgia, and headache; however, different viruses cause different symptoms.

Most cases of viral pneumonia are mild and fade away without treatment within 1 to 3 weeks. More serious cases may require hospitalization and people typically at risk are those with an impaired immune system. Antibiotics are ineffective in treating viral pneumonia, but the more serious forms of viral pneumonia can be treated with antiviral medications. Furthermore, other supportive care includes the use of humidified air, increased fluid intake, and oxygen. Hospitalization may be required to prevent dehydration and to help with breathing. Complications can result in respiratory failure, liver failure, heart failure, and sometimes bacterial infections can follow a viral infection, resulting in a more serious form of pneumonia.

Hantavirus Pulmonary Syndrome

Hantavirus pulmonary syndrome (HPS) is a deadly disease caused by a group of viruses called hantaviruses. It is carried by rodents and humans can contract the disease when they come into contact with infected rodents, their urine, and/or droppings. Person-to-person transmission has not been reported. HPS first appeared in the United States in 1993, but it has been found and recognized by authorities since 1978 in South America and Asia.

A hantavirus infection at first appears similar to a severe cold or influenza and is accompanied by fever and muscle aches. The infection then quickly progresses to severe respiratory difficulties and to acute respiratory distress syndrome (ARDS), with fatalities occurring in 30% to 40% of cases. In ARDS, gas exchange and therefore oxygen uptake in the lungs is severely impaired, compromising the functionality of all the organs of the body. Although some experimental use of antiviral drugs has been done, at present the main treatment for ARDS is mechanical ventilation.

Rodent control in and around homes is essential and the CDC has issued guidelines for rodent extermination and avoidance for residents, workers, campers, and hikers in affected areas. HPS has been publicized as an emerging infectious disease as well as an agent considered to be a possible bioterrorist threat.

Severe Acute Respiratory Syndrome (SARS)

SARS is a respiratory illness caused by the SARS coronavirus. The original outbreak (November 2002) seems to have originated in mainland China. The disease spread worldwide over several months before the outbreak was curtailed with help from and coordination by the WHO. This first global outbreak of SARS was reported to have a mortality rate of 9.6% between 2002 and 2003 (see Health Care Application: Global SARS Outbreak).

HEALTHCARE APPLICATION
Global SARS Outbreak (November 2002–July 2003)*

Country Cases Deaths
China 5327 348
Hong Kong 1755 298
Taiwan 671 84
Canada 250 38
Singapore 206 32
United States 75 0
Vietnam 63 5
Philippines 14 2
Other 76 6
Total 8436 812

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*Source: Centers for Disease Control and Prevention (http://www.who.int/csr/sars/country/2003_07_09/en/)

SARS seems to be transmitted by close person-to-person contact, most readily by respiratory droplets depositing on the mucous membranes of a nearby individual. SARS can be life-threatening and the symptoms include high fever, headache, body aches, and a dry cough, followed by pneumonia. Some patients may develop diarrhea as well. Symptoms usually appear 2 to 10 days after exposure, but in most cases symptoms appear within 2 or 3 days and about 10% to 20% of cases require assisted mechanical ventilation. Support with antipyretics, supplemental oxygen, and additional ventilatory support as needed, constitute the only treatment available to date.

Fungal Infections

Fungi can cause infections of the skin, hair, nails and also of the respiratory system. Respiratory diseases caused by fungi most commonly involve the lungs and are referred to as deep mycoses. These diseases include histoplasmosis, coccidioidomycosis, blastomycosis, and aspergillosis (Table 11.3). Dimorphism in some fungi (see Fungi in Chapter 8, Eukaryotic Microorganisms) can aid in infection as the single-celled yeast can more easily spread throughout the body via the bloodstream.

TABLE 11.3

Fungal Infections Acquired Through the Respiratory Tract

Illness/Disease Organism(s) Target of Infection Transmission
Pulmonary blastomycosis Blastomyces dermatitidis Lungs Inhalation of spores from dust
Histoplasmosis Histoplasma capsulatum Alveolar macrophages in lungs Inhalation of spores near bird droppings
Coccidioidomycosis Coccidioides immitis Alveolar spaces of lungs Inhalation of spores
Pneumocystis pneumonia Pneumocystis carinii Lungs Inhalation of spores
Aspergillosis Aspergillus spp. Lungs Inhalation of spores

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Histoplasmosis

Histoplasma capsulatum (Figure 11.13) infections are generally acute respiratory infections that occur in all age groups and in both sexes. The disease affects primarily the lungs and occasionally other organs. The infections are more frequent in adult males, probably because of more frequent occupational exposure. Transmission occurs by inhalation of airborne conidia of the fungus (see Chapter 8). Reservoirs of the organism can be found in soil around old chicken houses, starling bird roosts, and bat caves.

Most infected persons do not have apparent symptoms, but the acute infection shows symptoms that resemble those of tuberculosis, usually occurring 10 days after exposure. Symptoms after extensive exposure to the fungus include fever, headache, and nonproductive cough. A progressive form of the disease generally occurs in the young and elderly, and including anyone with immune deficiency. H. capsulatum is an intracellular parasite that first attacks the alveolar macrophages in the lungs. The macrophages then disperse the fungus via the blood and lymph, and the disease can become disseminated. Mild cases may not require treatment; others can be treated with antifungal drugs. If untreated this form is fatal. To reduce the risk of infection the following precautions can be taken:

Coccidioidomycosis

The causative agent of coccidioidomycosis is Coccidioides immitis (Figure 11.14), which resides in the soil of certain parts of the southwestern United States (Arizona, California, Nevada, New Mexico, and Texas), parts of Mexico, and areas in South America. Reservoirs include desert soil, rodent burrows, archaeological remains, and mines. Transmission occurs by inhalation of airborne arthroconidia. Exposure often occurs after natural disasters such as dust storms and earthquakes, potentially exposing thousands of people. This type of exposure is also possible after disturbance of soil by humans. Dust that covers material from endemic areas can also serve as the vehicle of infection; these materials include but are not limited to Native American pots, blankets, and other items sold to tourists, especially in recreational areas.

Although about 60% of the infections fail to cause symptoms, the other 40% result in symptoms ranging in degree from mild to severe. The disease manifests itself as acute, chronic, or disseminated. Symptomatic infections present as cough, chest pain, fever, chills, night sweats, headache, muscle stiffness, muscle aches, joint stiffness, neck and shoulder stiffness, rash, blood-tinged sputum, loss of appetite, weight loss, wheezing, excessive sweating, change in mental status, and sensitivity to light. The acute form of the disease usually fades away without treatment; bed rest and treatment of the flulike symptoms may be recommended. The acute form may become chronic or result in a widespread infection throughout the body. The outcome of chronic infections, if treated, is usually good, but relapses may occur. These relapses usually occur in people with a compromised immune system. If the disease becomes disseminated to other organ systems it can result in a high mortality rate. Disseminated or severe disease should be treated with antifungal medications.

Blastomycosis

Blastomycosis is an acute or chronic infection caused by the pathogen Blastomyces dermatitidis (Figure 11.15). Spores of the fungus generally enter the body by inhalation to affect primarily the lungs, but occasionally spread via the bloodstream to other areas of the body, including the skin. The reservoirs for Blastomyces dermatitidis are primarily wood and soil. Blastomycosis is considered a rare infection and occurs primarily in the south–central and Midwestern United States and Canada. In addition, infections have also been observed in widely scattered areas of Africa. The disease often affects people with a compromised immune system, such as patients receiving transplants and patients undergoing chemotherapy.

Blastomycosis of the lung may be asymptomatic but generally presents itself in one of the following ways:

• A flulike condition with fever, chills, myalgias, headache, and a nonproductive cough that resolves itself within days

• An acute illness with symptoms similar to those of bacterial pneumonia, including high fever, chills, a productive cough (brown or bloody mucus), and pleuritic chest pain

• A chronic illness resembling tuberculosis or lung cancer. The symptoms include low-grade fever, a productive cough, night sweats, and weight loss

• A speedy, progressive, and severe disease that causes acute respiratory distress syndrome (ARDS), a life-threatening condition that causes lung swelling and fluid buildup in the air sacs. This condition is a medical emergency, because the fluid inhibits gas exchange and therefore the passage of oxygen from the air into the bloodstream is compromised.

If the blastomycosis infection stays in the lungs it may not require medication unless it becomes severe. When blastomycosis spreads and affects other areas of the body, antifungal treatment will be required that may have to be continued for months. Untreated systemic infections slowly worsen and can become lethal.

Pulmonary Aspergillosis

Pulmonary aspergillosis is caused by one or more species of Aspergillus (Figure 11.16), a mold commonly found in decaying plants, stored hay, compost piles, bird droppings, and any site where excess dust accumulates. Given the appropriate conditions, the organism forms large amounts of spores that are ultimately released into the environment, where they may remain suspended for long periods of time. Aspergillus spp. can also be found in the hospital environment, including showerheads, hospital water storage tanks, and potted plants. Aspergillus conidia (spores) are small, can easily be transmitted by inhalation, and subsequently may colonize in the upper or lower respiratory tracts. The respiratory tract is the most frequent and most important portal of entry for this fungus. At present there is no evidence of person-to-person transmission. Pulmonary aspergillosis has been subdivided into four major forms:

The main treatment for aspergillosis is provided by antifungal drugs, which are sometimes administered intravenously. Antifungal medication does not work for allergic reactions and the use of steroids and relief medications such as bronchodilators may be necessary under these circumstances. A fungus ball generally does not require treatment unless bleeding into the lung occurs, in which case surgical removal of the fungal mass may be required.

Summary

• Structurally and functionally the respiratory system can be divided into the upper respiratory tract including the nose, pharynx and associated structures, and the lower respiratory system consisting of the larynx, trachea, bronchi, and lungs.

• The upper respiratory tract is colonized by normal flora commonly represented by Staphylococcus aureus and S. epidermidis, but other organisms also might be part of the normal flora, typically in much lower numbers.

• Bacterial infections of the respiratory tract can be caused by Staphylococcus, Streptococcus, Klebsiella, Haemophilus, Bordetella, Corynebacterium, Mycobacterium, Legionella, Mycoplasma, Chlamydia, and Coxiella.

• Bacterial infections caused by the normal flora are generally secondary infections commonly occurring after damage to the mucosal lining due to viral infections such as the common cold.

• Other opportunistic infections involve bacteria that normally do not cause infection in the healthy adult, but are common in people with a compromised immune system.

• Rare and opportunistic bacterial infections include staphylococcal pneumonia, Haemophilus infections, Klebsiella pneumonia, diphtheria, legionellosis, psittacosis, inhalation anthrax, and Q fever.

• Many different viruses are frequent intruders of the nasopharynx and are responsible for the common cold, a normally self-limiting infection, and the most frequent of all human diseases.

• Primary causes for epidemics and endemic diseases of the respiratory system are the influenza viruses, which are capable of rapid mutations. Epidemics in the United States usually occur during the winter months, causing disease among all age groups, and can be potentially dangerous for the very young, the old, people with chronic diseases, and immunocompromised persons.

• In addition to the common cold and influenza, viral pneumonia, hantavirus pulmonary syndrome, and SARS are viral infections transmitted via the respiratory system.

• Respiratory diseases caused by fungi most commonly involve the lungs. They are referred to as deep mycoses, and include histoplasmosis, coccidioidomycosis, blastomycosis, and aspergillosis.

Review Questions

1. All of the following are structures of the lower respiratory system except:

2. Scarlet fever is caused by:

3. Which of the following organisms is commonly found in the normal flora of the upper respiratory system?

4. Whooping cough is caused by:

5. Which of the following cannot be and should not be treated with antibiotics?

6. Tuberculosis cannot be transmitted by:

7. The most virulent pathogen of the human flu virus is type:

8. SARS is a respiratory illness caused by:

9. Which of the following geographic areas contains reservoirs for Coccidioides immitis?

10. The formation of a “fungus ball” within preexisting cavities is a common development in:

11. Streptococcus pneumoniae is a gram-__________ bacterium.

12. Rheumatic fever is a rare complication of __________.

13. Parrot fever is caused by __________.

14. Legionellosis affects mainly the __________.

15. Hantaviruses, which can cause disease in humans, are carried by __________.

16. Describe the different types of respiratory infections caused by streptococcal species.

17. Discuss the reemergence of tuberculosis and MDR-TB.

18. Name the two distinct forms of legionellosis.

19. Discuss organisms that enter the human body via the respiratory tract and that can be a potential bioterrorism threat.

20. Describe the most common fungal respiratory infections.