Campylobacter, Arcobacter, and Helicobacter

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Campylobacter, Arcobacter, and Helicobacter

Because of morphologic similarities and an inability to recover these organisms using routine laboratory media for primary isolation, the genera Campylobacter, Arcobacter, and Helicobacter are considered in this chapter (Figure 34-1). All organisms belonging to these genera are small, curved, motile, gram-negative bacilli. With few exceptions, most of these bacteria also have a requirement for a microaerobic (5% to 10% O2) atmosphere.

Campylobacter and Arcobacter

General Characteristics

Campylobacter and Arcobacter spp. are relatively slow growing, fastidious, and, in general, asaccharolytic; organisms known to cause disease in humans are listed in Table 34-1.

TABLE 34-1

Campylobacter and Arcobacter spp., Their Source, and Spectrum of Disease in Humans

Organism Source Spectrum of Disease in Humans
C. concisus, C. curvus, C. rectus, C. showae Humans Periodontal disease; gastroenteritis (?)
C. gracilis Humans Deep-tissue infections: head, neck, and viscera; gingival crevices
C. coli Pigs, poultry, sheep, bulls, birds
C. jejuni subsp. jejuni Poultry, pigs, bulls, dogs, cats, birds, and other animals
C. jejuni subsp. doylei Humans
C. lari Birds, poultry, other animals; river and seawater
C. hyointestinalis subsp. hyointestinalis Pigs, cattle, hamsters, deer Gastroenteritis
C. upsaliensis Dogs, cats
C. fetus subsp. fetus Cattle, sheep
C. fetus subsp. venerealis Cattle Septicemia
C. sputorum biovar sputorum Humans, cattle, pigs
Arcobacter cryaerophilus Pigs, bulls, and other animals
A. butzleri Pigs, bulls, humans, other animals; water

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*Most common clinical presentation.

Epidemiology and Pathogenesis

The majority of Campylobacter species are pathogenic and associated with a wide variety of diseases in humans and other animals. These organisms demonstrate considerable ecologic diversity. Campylobacter spp. are microaerophilic (5% to 10% O2) inhabitants of the gastrointestinal tracts of various animals, including poultry, dogs, cats, sheep, and cattle, as well as the reproductive organs of several species. When random fecal samples from chicken carcasses from butcher shops in the New York City area were tested for Campylobacter, 83% of the samples yielded more than 10 colony-forming units per gram of feces. In general, Campylobacter spp. produce three syndromes in humans: febrile systemic disease, periodontal disease, and, most commonly, gastroenteritis. Arcobacter species appear to be associated with gastroenteritis. Studies have indicated that A. butzleri was the fourth most common Campylobacter-like organism isolated from stool and was associated with a persistent, watery diarrhea. In addition, more recent data indicate that Arcobacter is underreported in gastrointestinal infections and diarrhea throughout many European countries. The organism is found in the environment and in untreated water. It is also prevalent in commercially prepared meats including chicken, beef, pork, lamb, and poultry.

Within the genus Campylobacter, C. jejuni and C. coli are commonly associated with infections in humans and are transmitted via contaminated food, milk, or water. Outbreaks have been associated with contaminated drinking water and improperly pasteurized milk, among other sources. In contrast to other agents of foodborne gastroenteritis, including Salmonella and staphylococci, Campylobacter spp. does not multiply in food. Other campylobacters have been isolated from patients as a result of consumption of untreated water, immunocompromised patients, or patients recently returned from international travel. C. jejuni subsp. doylei has been isolated from children with diarrhea and from gastric biopsies in adults. In developed countries, the majority of C. jejuni infections are transmitted by direct contact during the preparation and eating of chicken. Person-to-person transmission of Campylobacter infections plays only a minor role in the transmission of disease. There is a marked seasonality with the rates of C. jejuni infection in the United States; the highest rates of infection occur in late summer and early fall. Campylobacter spp. has been recognized as the most common etiologic agent of gastroenteritis in the United States.

Although infections with C. jejuni are evident as a result of acute inflammatory enteritis of the small intestine and colon, the pathogenesis remains unclear. However, multiplication of organisms in the intestine leads to cell damage and an inflammatory response. Blood and polymorphonuclear neutrophils are often observed in patient stool specimens. Most strains of C. jejuni are susceptible to the nonspecific bactericidal activity of normal human serum; this susceptibility probably explains why C. jejuni bacteremia is uncommon.

Spectrum of Disease

As previously mentioned, Campylobacter species are the causative agent of gastrointestinal or extraintestinal infections. An increase in extraintestinal disease, including meningitis, endocarditis, and septic arthritis has been reported in patients with acquired immunodeficiency syndrome (AIDS) and other immunocompromised individuals. The different campylobacters and the associated diseases are summarized in Table 34-1. Gastroenteritis associated with Campylobacter spp. is usually a self-limiting illness and does not require antibiotic therapy. Most recently, postinfectious complications with C. jejuni have been recognized and include reactive arthritis and Guillain-Barré syndrome, an acute demyelination (removal of the myelin sheath from a nerve) of the peripheral nerves. Studies indicate that 20% to 40% of patients with this syndrome are infected with C. jejuni 1 to 3 weeks prior to the onset of neurologic symptoms.

Laboratory Diagnosis

Specimen Collection, Transport, and Processing

There are no special requirements for the collection, transport, and processing of clinical specimens for the detection of campylobacters; the two most common clinical specimens submitted to the laboratory are feces (rectal swabs are also acceptable for culture) and blood. Specimens should be processed as soon as possible. Delays of more than 2 hours require the stool specimen to be placed either in Cary-Blair transport medium or in campy thio, a thioglycollate broth base with 0.16% agar and vancomycin (10 mg/L), trimethoprim (5 mg/L), cephalothin (15 mg/L), polymyxin B (2500 U/L), and amphotericin B (2 mg/L). Cary-Blair transport medium is suitable for other enteric pathogens; specimens received in transport medium should be processed immediately or stored at 4° C until processed.

Direct Detection

Upon gram staining, Campylobacter spp. display a characteristic microscopic morphology as small, curved or seagull-winged, faintly staining, gram-negative rods (Figure 34-2). Polymerase chain reaction (PCR) amplification may provide an alternative to culture methods for the detection of Campylobacter spp. from clinical specimens. The detection of Campylobacter DNA in stools from a large number of patients with diarrhea suggests that Campylobacter spp. other than C. jejuni and C. coli may account for a proportion of cases of acute gastroenteritis in which no etiologic agent is identified.

Cultivation

Stool.

Successful isolation of Campylobacter spp. from stool requires selective media and optimum incubation conditions. Recommended inoculation of two selective agars is associated with increased recovery of the organisms. Because Campylobacter and Arcobacter spp. have different optimum temperatures, two sets of selective plates should be incubated, one at 42° C and one at 37° C. Extended incubation may be required, 48 to 72 hours, before there is evidence of visible growth. Table 34-2 describes the selective plating media and incubation conditions required for the recovery of Campylobacter spp. from stool specimens.

42° C microaerobic conditions* for 72 hours 37° C under microaerobic conditions for at least 72 hours up to 7 days A. cryaerophilus, A. butzleri Campy-CVA 37° C under microaerobic conditions§ for 72 hours

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*Atmosphere can be generated in several ways, including commercially produced, gas-generating envelopes to be used with plastic bags or jars. Evacuation and replacement in plastic bags or anaerobic jars with an atmosphere of 10% CO2, 5% O2, and the balance of nitrogen (N2) is the most cost-effective method, although it is labor intensive.

All these organisms are susceptible to cephalothin.

C. upsaliensis will grow at 42° C but not on cephalothin-containing selective agar.

§A. cryaerophilus does not require microaerobic conditions.

A filtration method can also be used in conjunction with a nonselective medium to enhance recovery of Campylobacter and Arcobacter spp. A filter (0.65-μm pore-size cellulose acetate) is placed on the agar surface, and a drop of stool is placed on the filter. The plate is incubated upright. After 60 minutes at 37° C, the filter is removed and the plates are reincubated in a microaerobic atmosphere. The organisms are motile and capable of migrating through the filter, producing isolated colonies on the agar surface and effectively removing contaminating stool flora. C. concisus, A. butzleri, A. cryaerophilus, and H. cinaedi have been isolated following 5 to 6 days of incubation using the filter technique. An enrichment broth may also be used for the recovery of Arcobacter or Campylobacter species from stool.

Blood.

Campylobacter spp. are capable of growth in less than 5 days in most blood culture media, although they may require extended incubation periods of up to 2 weeks for detection. Subcultures should be incubated in 5% to 10% O2 (microaerobic) environment. Turbidity may not visible in blood culture media; therefore, blind subcultures or microscopic examination using acridine orange stain may be necessary. The presence of Campylobacter spp. in blood cultures is effectively detected through carbon dioxide (CO2) monitoring. Isolation from sources other than blood or feces is extremely rare. Recovery of the organisms is enhanced by inoculation (minced tissue, wound exudate) to a nonselective blood or chocolate agar plate and incubation at 37° C in a CO2-enriched, microaerobic atmosphere. (Selective agars containing a cephalosporin, rifampin, and polymyxin B may inhibit growth of some strains and should not be used for isolation from sterile sites.)

Approach to Identification

Plates should be examined for characteristic colonies, which are gray to pinkish or yellowish gray and slightly mucoid looking; some colonies may exhibit a tailing effect along the streak line (Figure 34-3). Colony morphology varies with the type of medium used for isolation. Suspicious-looking colonies observed on selective media incubated at 42° C may be presumptively identified as Campylobacter spp., usually C. jejuni or C. coli, with a few basic tests. A wet preparation of the organism in broth may be examined for characteristic darting motility and curved morphology on Gram stain. Both organisms are cephalothin resistant, nalidixic acid sensitive, and sensitive to lysis by complement. C. fetus is incapable of growth at 42°, and optimal growth is 37°; it is cephalothin sensitive, nalidixic acid resistant, and resistant to complement lysis.

Almost all the pathogenic Campylobacter spp. are oxidase positive and catalase positive. Frequently laboratories will report stool isolates as “Campylobacter spp.”

Most Campylobacter spp. are asaccharolytic, unable to grow in 3.5% NaCl, although strains of Arcobacter appear more resistant to salt and, except for Arcobacter cryaerophilus, unable to grow in ambient air. Growth in 1% glycine is variable. Susceptibility to nalidixic acid and cephalothin, as previously described (Table 34-3), is determined by inoculating a 5% sheep blood or Mueller-Hinton agar plate with a McFarland 0.5 turbidity suspension of the organism, placing 30-mg disks on the agar surface and incubating in 5% to 10% CO2 at 37° C. Other tests useful for identifying these species are the rapid hippurate hydrolysis test, production of hydrogen sulfide (H2S) in triple sugar iron agar slants, nitrate reduction, and hydrolysis of indoxyl acetate. Indoxyl acetate disks are available commercially. Cellular fatty acid analysis is useful for species identification. This method is not available in routine clinical microbiology laboratories. Several commercial products are available for species identification, including particle agglutination methods and nucleic acid probes.

TABLE 34-3

Differential Characteristics of Clinically Relevant Campylobacter, Arcobacter, and Helicobacter spp.

Genus and Species Growth at 25° C Growth at 42° C Hippurate Hydrolysis Catalase H2S in Triple Sugar Iron Agar Indoxyl Acetate Hydrolysis Nitrate to Nitrite Susceptible to 30-µg Disk Cephalothin Nalidixic Acid (30 µg)
C. coli + + + + +
C. concisus + + +
C. curvus* + + + + ND +
C. fetus subsp. fetus + −/+ + + + +
C. hyointestinalis +/− + + + +
C. jejuni subsp. jejuni + + + + + +
C. jejuni subsp. doylei +/− + +/− or weak + + + +
C. lari + + +
C. rectus* Slight + + + + ND +
C. sputorum + −/+ + + + −/+
C. upsaliensis + −/weak + + + + +
A. butzleri + −/weak + + + −/+ +/−
A. cryaerophilus + +/− + + −/+ +/−
H. cinaedi −/+ + −/+ + +/− +
H. fennelliae + + + +
H. pylori§ + + +/− +

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ND, Test not done; +, most strains positive; −, most strains negative; +/−, variable (more often positive); −/+, variable (more often negative).

*Anaerobic, not microaerobic.

Grows at 40° C.

Aerotolerant, not microaerobic; except for a few strains, A. cryaerophilus cannot grow on MacConkey agar, whereas A. butzleri grows on MacConkey agar.

§Strong and rapid positive urease.

Molecular assays based on PCR amplification of the 16S rRNA gene and direct sequencing of the PCR product have successfully been used to identify the majority of Campylobacter species. The assays accurately discriminate related taxa including Campylobacter, Arcobacter, or Helicobacter species. Finally, another approach using 16S-23S PCR-based amplification with a DNA probe colorimetric membrane assay proved to rapidly detect and identify Campylobacter in stool specimens.

Antimicrobial Susceptibility Testing and Therapy

Susceptibility tests for Campylobacter spp. are not standardized, and therefore testing of isolates is not routinely performed. C. jejuni and C. coli are susceptible to many antimicrobial agents, including macrolides, tetracyclines, aminoglycosides, and quinolones. Erythromycin is the drug of choice for patients with severe gastroenteritis (severe dehydration, bacteremia), with ciprofloxacin as an alternative therapeutic option. Previously, fluoroquinolones were the antibiotic therapy most frequently prescribed for Campylobacter infection; however, a rapidly increasing proportion of Campylobacter strains worldwide have been identified as fluoroquinolone resistant. Parenteral therapy (not taken through the alimentary canal but by an alternate route such as intravenous) is used to treat systemic infections.

Helicobacter

General Characteristics

In 1983, spiral-shaped organisms resembling Campylobacter spp. were isolated from the human stomach; these organisms were named Campylobacter pylori. Based on many studies, the genus Helicobacter was established in 1989 and C. pylori was renamed Helicobacter pylori. Approximately 32 species are included in this genus, the majority of which colonize mammalian stomachs or intestines. The genus Helicobacter consists of curved, microaerophilic, gram-negative rods, the majority of species exhibiting urease activity. Humans isolates include H. pylori, H. cinaedi, H. fennelliae, H. heilmannii (formerly known as Gastrospirillum hominis), H. westmeadii, H. canis, H. canadensis sp. nov., H. pullorum, and “H. rappini” (formerly known as “Flexispira rappini”). Human pathogens discussed here include H. pylori, H. cinaedi, and H. fennelliae.

Epidemiology and Pathogenesis

Helicobacter pylori’s primary habitat is the human gastric mucosa. The organism is distributed worldwide. Although acquired early in life in underdeveloped countries, the exact mode of transmission is unknown. An oral-oral, fecal-oral, and a common environmental source have been proposed as possible routes of transmission, with familial transmission associated with H. pylori infections. Research studies suggest mother-to-child transmission as the most probable cause of intrafamilial spread. In industrialized nations, antibody surveys indicate that approximately 50% of adults >60 years of age are infected by H. pylori. Gastritis incidence increases with age. H. pylori has occasionally been cultured from feces and dental plaque, thereby suggesting a fecal-oral or oral-oral transmission.

The habitat for H. cinaedi and H. fennelliae appears to be the human gastrointestinal tract, and the organisms may be normal flora; hamsters have also been proposed as a reservoir for H. cinaedi. Although the epidemiology of these organisms is not clearly delineated, these two bacterial agents have been associated with sexual transmission among homosexual men.

H. pylori is capable of colonizing the mucous layer of the antrum and fundus of the stomach but fails to invade the epithelium. Motility allows H. pylori to escape the acidity of the stomach and burrow through and colonize the gastric mucosa in close association with the epithelium. In addition, the organism produces urease that hydrolyzes urea-forming ammonia (NH3) significantly increasing the pH around the site of infection. The change in pH protects the organism from the acidic environment produced by gastric secretions. H. pylori also produces a protein called CagA and injects the protein into the gastric epithelial cells. The protein subsequently affects host cell gene expression inducing cytokine release and altering cell structure, and interactions with neighboring cells enabling H. pylori to successfully invade the gastric epithelium. Individuals who demonstrate positive antibody response to cag protein are at increased risk of developing both peptic ulcer disease and gastric carcinoma. Other possible virulence factors include adhesins for colonization of mucosal surfaces, mediators of inflammation, and a cytotoxin capable of causing damage to host cells (Table 34-4). Although H. pylori is noninvasive, untreated colonization persists despite the host’s immune response.

TABLE 34-4

Genes and Their Possible Role in Enhancing Virulence of H. pylori

Gene Possible Role
VacA Exotoxin (VacA)
Creates vacuoles in epithelial cells, decreases apoptosis, and loosens cell junctions
CagA Pathogenicity island
Encodes a type IV secretion system for transferring CagA proteins into host cells
BabA Encodes outer membrane protein: mediates adherence to blood group antigens on the surface of gastric epithelial cells
IceA Presence associated with peptic ulcer disease in some populations

Spectrum of Disease

H. cinaedi and H. fennelliae cause proctitis, enteritis, and sepsis in homosexual men. Septic shock caused by H. fennelliae was reported in a non-HIV-infected heterosexual immunocompromised patient. H. cinaedi has also been reported to cause septicemia, cellulitis, and meningitis in immunocompromised patients. H. pylori causes gastritis, peptic ulcer disease, and gastric cancer. However, most individuals tolerate the presence of H. pylori for decades with few, if any, symptoms.

Laboratory Diagnosis

Specimen Collection, Transport, and Processing

There are no special requirements for the collection, transport, or processing of stool or blood specimens for H. cinaedi and H. fennelliae. Tissue biopsy material of the stomach for detection of H. pylori should be placed directly into transport media such as Stuart’s transport medium to prevent drying. Specimens for biopsy may be refrigerated up to 24 hours before processing; tissues should be minced and gently homogenized.

Direct Detection

Pathologists use the Warthin-Starry or other silver stains and Giemsa stains to examine biopsy specimens. Squash preparations of biopsy material can be Gram-stained with good results; the 0.1% basic fuchsin counterstain enhances recognition of the bacteria’s typical morphology. Sampling error may occur during processing, therefore resulting in no identification of the organisms.

Presumptive evidence of the presence of H. pylori in biopsy material may be obtained by placing a portion of crushed tissue biopsy material directly into urease broth or onto commercially available urease agar kits. A positive test is considered indicative of the organism’s presence. Another noninvasive indirect test to detect H. pylori is the urea breath test. This test relies on the presence of H. pylori urease. The patient ingests radioactively labeled (13° C) urea, and if the organism is present, the urease produced by H. pylori hydrolyzes the urea to form ammonia and labeled bicarbonate that is exhaled as CO2; the labeled CO2 is detected by either a scintillation counter or a special spectrometer. This test has excellent sensitivity and specificity. Two enzyme immunoassays H. pylori stool antigen tests (Premier Platinum HpSA, Meridian Diagnostics, Inc., Cincinnati, Ohio; FemtoLab H. pylori, Connex, Martinsried, Germany) and a one-step immunochromatographic assay using monoclonal antibodies (Immunocard STAT! HpSA, Meridian Bioscience Europe) have been introduced to directly detect H. pylori. Finally, a variety of molecular methods have been developed to directly detect H. pylori in clinical specimens and to identify bacterial strains and host genotype characteristics, bacterial density in the stomach, as well as antimicrobial resistance patterns.

Cultivation

Stool specimens submitted for culture of H. cinaedi and H. fennelliae are inoculated onto selective media used for Campylobacter isolation but without cephalothin such as Campy-CVA. For the recovery of H. pylori from tissue biopsy specimens including gastric antral biopsies, nonselective agar media, including chocolate agar and Brucella agar with 5% sheep blood, have resulted in successful recovery of the organisms. Selective agar such as Skirrow’s and modified Thayer-Martin agar also support growth. Recently, the combination of a selective agar (Columbia agar with an egg yolk emulsion, supplements, and antibiotics) and a nonselective agar (modified chocolate agar with Columbia agar, 1% Vitox, and 5% sheep blood) was reported as the optimal combination for recovering H. pylori from antral biopsies. Incubation up to 1 week in a humidified, 5% to 10% O2 environment, at 35° to 37° C may be required before growth is visible.

Antimicrobial Susceptibility Testing and Therapy

Except for metronidazole and clarithromycin, most laboratory susceptibility assays are unsuccessful in predicting clinical outcome. Routine testing of H. pylori isolates’ susceptibility to metronidazole is recommended using the E-test and agar or broth dilution methods.

Therapy for H. pylori infection is problematic. H. pylori readily becomes resistant when metronidazole, clarithromycin, azithromycin, rifampin, or ciprofloxacin is prescribed as a single agent. Current regimens recommend triple-drug therapy including metronidazole, a bismuth salt, and either amoxicillin or tetracycline. An alternative and simple regimen for patients with metronidazole-resistant strains includes omeprazole or lansoprazole (proton pump inhibitors cause rapid symptom relief while working synergistically with the antibiotics) and amoxicillin or clarithromycin. Relapses occur often. Helicobacter spp. associated with enteritis and proctitis may respond to quinolones; however, appropriate therapy has not been established.

Prevention

No vaccines are available for H. pylori. However, several vaccines are under development.